BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B03SP1|AL425066
(956 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1151 1843 0.0
>3x_Contig1151
Length = 5859
Score = 1843 bits (928), Expect = 0.0
Identities = 952/958 (99%), Gaps = 3/958 (0%)
Strand = Plus / Minus
Query: 2 tgcgatgccttaccacttggccaaaggggctggaaacaattttcaagcatctgaagtgag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 tgcgatgccttaccacttggccaaaggggctggaaacaattttcaagcatctgaagtgag 1174
Query: 62 tdtgacgaccatagacactaatgtttgcgtgctcctgtacacgtgatgcaatttcatcac 121
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 tttgacgaccatagacactaatgtttgcgtgctcctgtacacgtgatgcaatttcatcac 1114
Query: 122 ttcctattgatgcctactgtttaatatcaaccctgcccacggtaagtattctacttacca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 ttcctattgatgcctactgtttaatatcaaccctgcccacggtaagtattctacttacca 1054
Query: 182 tgaccttctattgaacatttaacggacgtgttatggataatactcaaaatgactaatgtt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 tgaccttctattgaacatttaacggacgtgttatggataatactcaaaatgactaatgtt 994
Query: 242 atttgataattacactgaagcttctcataacaattggatatccaaatgttcaaaccaaca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 atttgataattacactgaagcttctcataacaattggatatccaaatgttcaaaccaaca 934
Query: 302 ataatcttatccgcataataatagaaaaaacaccatattgaggcctgctgaccccagatt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 ataatcttatccgcataataatagaaaaaacaccatattgaggcctgctgaccccagatt 874
Query: 362 ttaccatgttgcgtcaagggatacttggtatacgaagatacaacactttcagattacagt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 ttaccatgttgcgtcaagggatacttggtatacgaagatacaacactttcagattacagt 814
Query: 422 cgctttctgtggcaaggaaacggcctgctgtacatactcatcatgaagttgatcatgaat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 cgctttctgtggcaaggaaacggcctgctgtacatactcatcatgaagttgatcatgaat 754
Query: 482 catcggatacacataaagcacaggaagaactagatagcatctggaatggtctttcaagaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 catcggatacacataaagcacaggaagaactagatagcatctggaatggtctttcaagaa 694
Query: 542 tgatatacactcggaatttaacgatgtataattgtttcgttttgtttcagtattgtggga 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tgatatacactcggaatttaacgatgtataattgtttcgttttgtttcagtattgtggga 634
Query: 602 aatcggctgatggttcattagacgaaagtgatgtctccagattgtaccatacgttacgga 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aatcggctgatggttcattagacgaaagtgatgtctccagattgtaccatacgttacgga 574
Query: 662 ggaattacaggacaagcaatgtgatatatacgggtagttttaaccaatcggtattcaaca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ggaattacaggacaagcaatgtgatatatacgggtagttttaaccaatcggtattcaaca 514
Query: 722 attgttttaaggacgccatattaccggaaaataccaatgattccttactcctgtcccagt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 attgttttaaggacgccatattaccggaaaataccaatgattccttactcctgtcccagt 454
Query: 782 ttctgcaggtacagcaaccctctgttatttcaaagataatgtcaatagcagagaagcgtc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttctgcaggtacagcaaccctctgttatttcaaagataatgtcaatagcagagaagcgtc 394
Query: 842 attatacaccttcagttgtaggagttaaggtatctcaaaagtcatctctaawcccattga 901
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 393 attatacaccttcagttgtaggagttaaggtatctcaaaagtcatctctaatcccattga 334
Query: 902 aagaattgaag-ctcttttacagg-awtctctactatgtatgagga-ttcacttatga 956
||||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 333 aagaattgaagcctcttttacaggaattctctactatgtatgaggatttcacttatga 276
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6793
Number of Sequences: 1807
Number of extensions: 6793
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 956
length of database: 10,358,551
effective HSP length: 16
effective length of query: 940
effective length of database: 10,329,639
effective search space: 9709860660
effective search space used: 9709860660
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)